How to include highcharts motion plugin for bubble plot using R wrapper?

问题

Highcharts motion plugin - Requires 3 adjustments to a highchart.

The inclusion of the js asset
An option object for motion
Data to be within sequence arrays.

It seems like there are two main R wrappers for Highcharts. Ramnath's rCharts and the recently released on CRAN highcharter.

So my question: is it possible to animate a bubble highchart over time with the currently available wrappers and if so how?

rCharts Attempt 1 Starting with a bubble chart and introducing the 3 required motion options:

library(rCharts) # highcharts wrapper hPlot()

# data
set.seed(1)
df.SO <- data.frame(date = sample(2005:2016, 21, replace = T)
                    , x = rnorm(21, 10, 4)
                    , y = rnorm(21, 150, 4)
                    , z = rbinom(21, 80, .8)
                    , entities = sample(c("entity1","entity2","entity3"), 21, replace = T))

# chart
h1 <- hPlot(  x     = "x"
              , y     = "y"
              , size  = "z"
              , group = "entities"
              , data  = df.SO
              , type  = "bubble")

### Motion Charts plugin ###
## 1. include motion js asset in head
h1$addAssets(jshead = "https://rawgit.com/larsac07/Motion-Highcharts-Plugin/master/motion.js")

## 2. add motion object
h1$params$motion  <- list(enabled = "true",
                          labels  = unique(sort(df.SO$date)),
                          loop    = "true",
                          series  = 1,
                          updateInterval = 50,
                          magnet  = list(
                              round = "round",
                              step = 0.1))

## 3. sequence data?? Dead end approach??

# view chart - displays bubbles and widget to play animation, but animation fails
print(h1)

rCharts - Attempt 2 Restructure data as sequences then feed into chart.

# 3. sequence data - cast data so entities are series and times are unique entries
library(data.table) ## v >= 1.9.6
test <- dcast(setDT(df.SO), date ~ entities, value.var = c("x", "y", "z"))

# chart
h1 <- Highcharts$new()
h1$chart(type = "bubble", height = 300)
h1$series(
    list(name = "entity1",
        data = list(
            sequence = test$x_length_entity1,
            sequence = test$y_length_entity1,
            sequence = test$z_length_entity1
        )
    ),
    list(name = "entity2",
         data = list(
             sequence = test$x_length_entity2,
             sequence = test$y_length_entity2,
             sequence = test$z_length_entity2
         )
    ), replace = T)

## 1. include motion js asset in head
h1$addAssets(jshead = "https://rawgit.com/larsac07/Motion-Highcharts-Plugin/master/motion.js")

## 2. add motion object
h1$params$motion  <- list(enabled = "true",
                          labels  = unique(sort(test$date)),
                          loop    = "true",
                          series  = 1,
                          updateInterval = 50,
                          magnet  = list(
                              round = "round",
                              step = 0.1))

# view chart - this approach doesn't display any bubbles
print(h1)

回答1:

Luke,

motion.js plugin was added to highcharter. Is in development version (download via devtools), it's need more testing but is it a start.

Please check the example in http://jkunst.com/highcharter/plugins.html#motion:

  highchart() %>% 
    hc_chart(type = "column") %>% 
    hc_yAxis(max = 6, min = 0) %>% 
    hc_add_series(name = "A", data = c(2,3,4), zIndex = -10) %>% 
    hc_add_series(name = "B",
                  data = list(
                    list(sequence = c(1,2,3,4)),
                    list(sequence = c(3,2,1,3)),
                    list(sequence = c(2,5,4,3))
                  )) %>% 
    hc_add_series(name = "C",
                  data = list(
                    list(sequence = c(3,2,1,3)),
                    list(sequence = c(2,5,4,3)),
                    list(sequence = c(1,2,3,4))
                  )) %>% 
    hc_motion(enabled = TRUE,
              labels = 2000:2003,
              series = c(1,2))

If you find any suspicions behavior (aka bugs) please report here: https://github.com/jbkunst/highcharter/issues

Hope it helps

回答2:

Have you considered shiny as a temporary solution?

library(shiny)
library(rCharts)
library(dplyr)

server <- shinyServer(function(input, output) {

  output$bubblePlot <- renderChart2({

    # data
    set.seed(1)
    df.SO <- data.frame(date = sample(2005:2016, 21, replace = T)
                        , x = rnorm(21, 10, 4)
                        , y = rnorm(21, 150, 4)
                        , z = rbinom(21, 80, .8)
                        , entities = sample(c("entity1","entity2","entity3"), 21, replace = T))

    # filter data based on selected year
    df.SO.select <- dplyr::filter(df.SO, date == input$date)

    # chart
    h1 <- hPlot(  x     = "x"
                  , y     = "y"
                  , size  = "z"
                  , group = "entities"
                  , data  = df.SO.select
                  , type  = "bubble")
    h1$addParams(dom = "bubbleChart")
    h1$plotOptions(series = list(animation = FALSE))
    h1$xAxis(min = min(df.SO$x), max = max(df.SO$x))
    h1$yAxis(min = min(df.SO$y), max = max(df.SO$y))
    h1

  })

})

ui <- shinyUI(fluidPage(

  # Application title
  titlePanel("Highcharts Bubble Motion Chart"),

  # Sidebar with a slider input for the selected year
  sidebarLayout(
    sidebarPanel(
      sliderInput("date",
                  "Date:",
                  min = 2007,
                  max = 2016,
                  value = 2007,
                  animate = TRUE,
                  sep = "")
    ),

    # Show a bubble plot for the selected year
    mainPanel(
      showOutput("bubblePlot", "highcharts")
    )
  )
))

shinyApp(ui = ui, server = server)

回答3:

Surprising I couldn't find any posted examples demonstrating bubble or scatter as the chart type with hc_motion. All examples are either, bar, column, map, pie.

Anyway, after a fair bit of hit & miss, I managed to get scatter plot working doing the following on the sequence. each vector c(1,1) represents x & y coordinates. I'm still trying to get it working with bubble with no luck. Hoping someone might be able to post an code snippet for bubble using the hcaes() format.

Bubble would be handy for motion, as you can then do Gapminder style charts. http://www.gapminder.org/

library(highcharter)

    highchart() %>% 
            hc_chart(type = "scatter") %>% 
            hc_yAxis(max = 6, min = 0) %>% 
            hc_xAxis(max = 6, min = 0) %>%
            hc_add_series(name = "Australia",
                          data = list(
                                  list(sequence = list(c(1,1),c(2,2),c(3,3),c(4,4)))
                          )) %>%
            hc_add_series(name = "United States",
                          data = list(
                                  list(sequence = list(c(0,0),c(3,2),c(4,3),c(4,1)))
                          )) %>%
            hc_add_series(name = "China",
                          data = list(
                                  list(sequence = list(c(3,2),c(2,2),c(1,1),c(2,5)))
                          )) %>% 
            hc_motion(enabled = TRUE,
                      labels = 2000:2003,
                      series = c(0,1,2))

来源：https://stackoverflow.com/questions/35979227/how-to-include-highcharts-motion-plugin-for-bubble-plot-using-r-wrapper

标签

javascript

Highcharts

rcharts