install.packages

I've never had any issues installing packages on R, but I always have issues installing packages on Microsoft R Open. For example, I attempted to install tidyverse. I received many errors, listed below: > Warning in system(cmd) : error in running command ERROR: compilation > failed for package ‘colorspace’ > * removing ‘/home/myFilePath/R/x86_64-pc-linux-gnu-library/3.5/colorspace’ > Warning in install.packages : installation of package ‘colorspace’ > had non-zero exit status > * installing *source* package ‘mnormt’ ... > ** package ‘mnormt’ successfully unpacked and MD5 sums checked > ** libs

I need to install different packages on R. The OS is ubuntu for windows. When I try "BiocManager::install("Biobase") I get the following error: ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries mv: cannot move '/home/mark/R/x86_64-pc-linux-gnu-library/3.6/00LOCK-Biobase/00new/Biobase' to '/home/mark/R/x86_64-pc-linux-gnu-library/3.6/Biobase':

I try to install the package "data.table" (and "aws.s3)" via Rstudio Server on an Amazon Linux instance following this guide: http://stanke.co/category/r/ Unfortunately, I get the following error message. I really don't know what else to do. Can anybody help? I installed devtools and I am able to install other packages such as xml2, devtools and deplyr. I had the same issue on AWS and already fixed. You need first install gcc64 and openmp shared support library. sudo yum install gcc64 sudo yum install libgomp Then under your user home create an .R folder with a Makevars file in it, with the

I am trying to install a package in R from the CRAN repository. I have to pass a flag at the configure stage, but I can't figure out how to do it in install.packages : > install.packages("Rmpfr") .......... checking mpfr.h usability... no checking mpfr.h presence... no checking for mpfr.h... no configure: error: Header file mpfr.h not found; **maybe use --with-mpfr-include=INCLUDE_PATH** (Note: I have MPFR installed in a custom location, since I am not root). But how do I pass a specific flag with argument to the install.package command of R ? .e.g " --with-mpfr-include=/path/to/mpfr/include "

On Ubuntu 14.04, trusty: install.packages('topicmodels') Error message: compilation terminated. make: *** [ctm.o] Error 1 ERROR: compilation failed for package ‘topicmodels’ * removing ‘/home/.../R/x86_64-pc-linux-gnu-library/3.1/topicmodels’ The downloaded source packages are in ‘/tmp/Rtmp1L79dj/downloaded_packages’ Warning message: In install.packages("topicmodels") : installation of package ‘topicmodels’ had **non-zero exit status** I found out that on two of my Ubuntu installations, the non-zero exit status was caused by not having the gsl package. However, it took me quite sometime before

When I tried to install packages on my work laptop, I got an error. I've been told that I have full privileges with the laptop, so there should be no blocks. I think it might be something to do with the file path to the library where installed packages go? I'm using both the latest version of R and R Studio, 64-bit, and using Canada's U of T CRAN mirror site. Here is what comes up when I try to install plyr with install.packages("plyr") also installing the dependency ‘Rcpp’ Packages which are only available in source form, and may need compilation of C/C++/Fortran: ‘Rcpp’ ‘plyr’ And when I try