问题
h2o
was working before on my laptop, but I didn't use it for a while
(and have installed new packages and updated things in the meantime). Yesterday I tried using it, but it didn't work. I erased the R
h2o
packaged and I've reinstalled h2o
from scratch with
install.packages("h2o")
I tried running h2o
with h2o.init()
but it gives me this error
java version "9"
Java(TM) SE Runtime Environment (build 9+181)
Java HotSpot(TM) 64-Bit Server VM (build 9+181, mixed mode)
Starting H2O JVM and connecting: ............................................................
[1] "localhost"
[1] 54321
[1] TRUE
[1] -1
[1] "Failed to connect to localhost port 54321: Connection refused"
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0curl: (7) Failed to connect to localhost port 54321: Connection refused
[1] 7
Error in h2o.init() : H2O failed to start, stopping execution.
When I look at the error log it shows
Only Java 1.6-1.8 supported, version is 9
I tried to look for more info and I think the error is triggered by this code on line 1836:
if (version != null && !(version.startsWith("1.6") || version.startsWith("1.7") || version.startsWith("1.8"))) {
System.err.println("Only Java 1.6-1.8 supported, version is " + version);
return true;
So it seems h2o
is checking for a version that starts with 1.6, 1.7 and 1.8 but my version for some reason starts with 9!
However, on the terminal, java -version
gives
openjdk version "1.8.0_121"
OpenJDK Runtime Environment (Zulu 8.20.0.5-macosx) (build 1.8.0_121-b15)
OpenJDK 64-Bit Server VM (Zulu 8.20.0.5-macosx) (build 25.121-b15, mixed mode)
and which java
gives
/Users/myusername/anaconda3/bin/java
------------ EDIT -------
More info: /usr/libexec/java_home -V
gives
Matching Java Virtual Machines (4):
9, x86_64: "Java SE 9" /Library/Java/JavaVirtualMachines/jdk-9.jdk/Contents/Home
1.8.0_144, x86_64: "Java SE 8" /Library/Java/JavaVirtualMachines/jdk1.8.0_144.jdk/Contents/Home
1.8.0_51, x86_64: "Java SE 8" /Library/Java/JavaVirtualMachines/jdk1.8.0_51.jdk/Contents/Home
1.8.0_25, x86_64: "Java SE 8" /Library/Java/JavaVirtualMachines/jdk1.8.0_25.jdk/Contents/Home
Which explains the 9
that h2o
is seeing. I find it weird that it expects 1.x.0
but the version is just 9
. In any case, it seems I need to point that h2o.init()
command to the 1.8
java, but I couldn't figure out how to do it.
I usually use brew
to install most things, but I never use java
so I don't know anything about the versions.
Thanks and best!
回答1:
The error you reported says:
Only Java 1.6-1.8 supported, version is 9
Seems like you have Java 9 installed, which is not yet supported by H2O. Use a compatible version of Java and that will fix the error.
If you can't or don't want to uninstall Java 9, then you'll need to tell H2O which Java you'd like to use by setting the JAVA_HOME
environment variable. First, get the location of Java 1.8 by executing the following in a shell:
/usr/libexec/java_home -v 1.8
On my mac, it shows me this:
/Library/Java/JavaVirtualMachines/jdk1.8.0_45.jdk/Contents/Home
You can check if R can see your JAVA_HOME
variable by running the following command: Sys.getenv("JAVA_HOME")
.
If that's blank (and possibly will be if you're using RStudio), then will have to do a bit more work to get R to see the JAVA_HOME
variable. You can edit the ~/.Renviron
file to add JAVA_HOME=/Library/Java/JavaVirtualMachines/jdk1.8.0_45.jdk/Contents/Home
or whatever that location is on your machine. Then restart RStudio and it should work.
回答2:
I followed the discussion in this thread to get a solution to the problem, though it won't be that convenient for some people.
The default java
is 1.8.x, hence once that h2o
can use, but calling h2o
from R
results in the version 9 java
getting called.
The (rather patchy) solution for now is to start the h2o
server from the terminal like this
cd h2o-3.14.0.3 #navigate to wherever you have the h2o installation
java -jar h2o.jar
with that running fine, I then link it from R
without starting an h2o
instance:
h2o.init(startH2O = FALSE)
This works fine if you're ok with starting h2o
from the terminal (might be the only way if you're working on a cluster), but might be annoying if you want to start it from RStudio
right away.
来源:https://stackoverflow.com/questions/46490290/h2o-failed-to-connect-when-called-from-r-java-version-missmatch