pyarrow

How do i set the path of libhdfs.so for pyarrow?

雨燕双飞 提交于 2021-02-11 15:21:49
问题 I'm trying to use pyarrow and i keep getting the following error. ImportError: Can not find the shared library: libhdfs3.so so i read some stackoverflow and it says that i need to set enviorment variable for ARROW_LIBHDFS_DIR. The path to libhdfs.so is /usr/local/hadoop/native/ it tried to set it in bashrc but it didn't work the conda installation doesn't seem to work i.e. conda install libhdfs3 pip install libhdfs3 conda install -c clinicalgraphics libgcrypt11 conda install libprotobuf=2.5

How to use Pyarrow to achieve stream writing effect

↘锁芯ラ 提交于 2021-02-10 17:48:02
问题 The data I have is a kind of streaming data. And I want to store them into a single Parquet file. But Pyarrow will overwrite the Parquet file everytime. So How should I do? I try not to close the writer but it seems impossible since If I didn't close it, then I could not read this file. Here is the package: import pyarrow.parquet as pp import pyarrow as pa for name in ['LEE','LSY','asd','wer']: writer=pq.ParquetWriter('d:/test.parquet', table.schema) arrays=[pa.array([name]),pa.array([2])]

How to use Pyarrow to achieve stream writing effect

限于喜欢 提交于 2021-02-10 17:47:58
问题 The data I have is a kind of streaming data. And I want to store them into a single Parquet file. But Pyarrow will overwrite the Parquet file everytime. So How should I do? I try not to close the writer but it seems impossible since If I didn't close it, then I could not read this file. Here is the package: import pyarrow.parquet as pp import pyarrow as pa for name in ['LEE','LSY','asd','wer']: writer=pq.ParquetWriter('d:/test.parquet', table.schema) arrays=[pa.array([name]),pa.array([2])]

import pyarrow not working <- error is “ValueError: The pyarrow library is not installed, please install pyarrow to use the to_arrow() function.”

[亡魂溺海] 提交于 2021-02-08 15:47:12
问题 I have tried installing it in the terminal and in juypter lab and it says that it has been successfully installed but when I run df = query_job.to_dataframe() I keep getting the error " ValueError: The pyarrow library is not installed, please install pyarrow to use the to_arrow() function.". I have no idea how to fix this. Any advice? I am trying to access data from google data studio ultimately with the code, from google.cloud import bigquery import pandas import numpy import pyarrow

How to convert PyArrow table to Arrow table when interfacing between PyArrow in python and Arrow in C++

旧时模样 提交于 2021-02-08 04:37:27
问题 I have a C++ library which is built against the Apache Arrow C++ libraries, with a binding to python using Pybind. I'd like to be able to write a function in C++ to take a table constructed with PyArrow, like: void test(arrow::Table test); Passing in a PyArrow table like: tab = pa.Table.from_pandas(df) mybinding.test(tab) If I do a naive function as above, I get: TypeError: arrow_test(): incompatible function arguments. The following argument types are supported: 1. (arg0: arrow::Table) ->

Memory leaks when using pandas_udf and Parquet serialization?

一曲冷凌霜 提交于 2021-02-06 10:15:47
问题 I am currently developing my first whole system using PySpark and I am running into some strange, memory-related issues. In one of the stages, I would like to resemble a Split-Apply-Combine strategy in order to modify a DataFrame. That is, I would like to apply a function to each of the groups defined by a given column and finally combine them all. Problem is, the function I want to apply is a prediction method for a fitted model that "speaks" the Pandas idiom, i.e., it is vectorized and

Memory leaks when using pandas_udf and Parquet serialization?

╄→гoц情女王★ 提交于 2021-02-06 10:15:05
问题 I am currently developing my first whole system using PySpark and I am running into some strange, memory-related issues. In one of the stages, I would like to resemble a Split-Apply-Combine strategy in order to modify a DataFrame. That is, I would like to apply a function to each of the groups defined by a given column and finally combine them all. Problem is, the function I want to apply is a prediction method for a fitted model that "speaks" the Pandas idiom, i.e., it is vectorized and

Do memory mapped files in Docker containers in Kubernetes work the same as in regular processes in Linux?

两盒软妹~` 提交于 2021-01-28 10:34:43
问题 I have process A and process B. Process A opens a file, calls mmap and write to it, process B do the same but reads the same mapped region when process A has finished writing. Using mmap, process B is suppossed to read the file from memory instead of disk assuming process A has not called munmap. If I would like to deploy process A and process B to diferent containers in the same pod in Kubernetes, is memory mapped IO supposed to work the same way as the initial example? Should container B

Unable to load libhdfs

时间秒杀一切 提交于 2021-01-28 01:50:26
问题 Trying to use pyarrow to access hdfs file and not able to get it working, below is the code, thank you very much in advance. [rxie@cedgedev03 code]$ python Python 2.7.12 |Anaconda 4.2.0 (64-bit)| (default, Jul 2 2016, 17:42:40) [GCC 4.4.7 20120313 (Red Hat 4.4.7-1)] on linux2 Type "help", "copyright", "credits" or "license" for more information. Anaconda is brought to you by Continuum Analytics. Please check out: http://continuum.io/thanks and https://anaconda.org import pyarrow import os os

pyarrow data types for columns that have lists of dictionaries?

|▌冷眼眸甩不掉的悲伤 提交于 2021-01-07 01:36:23
问题 Is there a special pyarrow data type I should use for columns which have lists of dictionaries when I save to a parquet file? If I save lists or lists of dictionaries as a string, I normally have to .apply(eval) the field if I read it into memory again in order for pandas to recognize the data as a list (so I can normalize it with pd.json_normalize ) column_a: [ {"id": "something", "value": "else"}, {"id": "something2", "value": "else2"}, ] column_b: ["test", "test2", "test3"] Just wondering