conda

问题 I have the following Singularity container recipe: #!/bin/bash Bootstrap: docker From: nipype/nipype:latest %labels Version v1.0 %post # Install nano apt-get update apt-get install nano # Set up Python environment CONDA_ENV=/opt/conda/bin export PATH=$CONDA_ENV:$PATH chmod -R 777 $CONDA_ENV # Activate conda environment conda activate neuro conda install seaborn pip install pybids and I build the container with Singularity as follows: sudo singularity build swish.simg Singularity.swish The

问题 I have the following Singularity container recipe: #!/bin/bash Bootstrap: docker From: nipype/nipype:latest %labels Version v1.0 %post # Install nano apt-get update apt-get install nano # Set up Python environment CONDA_ENV=/opt/conda/bin export PATH=$CONDA_ENV:$PATH chmod -R 777 $CONDA_ENV # Activate conda environment conda activate neuro conda install seaborn pip install pybids and I build the container with Singularity as follows: sudo singularity build swish.simg Singularity.swish The

问题 I have the following Singularity container recipe: #!/bin/bash Bootstrap: docker From: nipype/nipype:latest %labels Version v1.0 %post # Install nano apt-get update apt-get install nano # Set up Python environment CONDA_ENV=/opt/conda/bin export PATH=$CONDA_ENV:$PATH chmod -R 777 $CONDA_ENV # Activate conda environment conda activate neuro conda install seaborn pip install pybids and I build the container with Singularity as follows: sudo singularity build swish.simg Singularity.swish The

问题 I have the following Singularity container recipe: #!/bin/bash Bootstrap: docker From: nipype/nipype:latest %labels Version v1.0 %post # Install nano apt-get update apt-get install nano # Set up Python environment CONDA_ENV=/opt/conda/bin export PATH=$CONDA_ENV:$PATH chmod -R 777 $CONDA_ENV # Activate conda environment conda activate neuro conda install seaborn pip install pybids and I build the container with Singularity as follows: sudo singularity build swish.simg Singularity.swish The

问题 I am setting up Visual Studio Code on my pc and am running into difficulties with the python environment I created and Visual Studio Code. However, when running some test code, I get an import error.. I installed Python 3.7.3 with miniconda to 'C:\Python37', and then created a clone of the base environment named 'sci' and installed some packages (numpy, pandas, matplotlib, scipy, scikit-learn) using cmd. I tested the install in cmd with commands as follows: conda activate sci python import

问题 I would like to create a Conda environment from a .yaml file on an offline machine (i.e. no Internet access). On an online machine this works perfectly fine: conda env create -f environment.yaml However, it doesn't work on an offline machine as the packages are then not found. How do I do this? If that's not possible is there another easy way to get my complete Conda environment to an offline machine (including both Conda and pip installed packages)? Going through the packages one by one to

问题 I would like to create a Conda environment from a .yaml file on an offline machine (i.e. no Internet access). On an online machine this works perfectly fine: conda env create -f environment.yaml However, it doesn't work on an offline machine as the packages are then not found. How do I do this? If that's not possible is there another easy way to get my complete Conda environment to an offline machine (including both Conda and pip installed packages)? Going through the packages one by one to

问题 I am wondering if it's possible to install npm packages directly through conda's environment.yml file. I know one can install pypi packages with pip directly as follows: name: docs channels: - conda-forge dependencies: - python>=3.7 - nodejs=10.* - pip - pip: - Sphinx==1.6.5 I've tried adding npm as a dependency as it's installed via nodejs but that doesn't work, unfortunately. name: docs channels: - conda-forge dependencies: - python>=3.7 - nodejs=10.* - pip - pip: - Sphinx==1.6.5 - npm: -

问题 I am wondering if it's possible to install npm packages directly through conda's environment.yml file. I know one can install pypi packages with pip directly as follows: name: docs channels: - conda-forge dependencies: - python>=3.7 - nodejs=10.* - pip - pip: - Sphinx==1.6.5 I've tried adding npm as a dependency as it's installed via nodejs but that doesn't work, unfortunately. name: docs channels: - conda-forge dependencies: - python>=3.7 - nodejs=10.* - pip - pip: - Sphinx==1.6.5 - npm: -