问题
I have successfully been able to get a pubmed results page in xml format and write the contents to a local file "Publications.xml". The problem is when I use simplexml_load_file("Publications.xml"), it fails. Not able to figure out why.
<?php
$feed = 'http://www.ncbi.nlm.nih.gov/pubmed?term=carl&sort=pubdate&report=xml';
$local = 'Publications.xml';
$curtime = time();
$filemodtime;
if( (!file_exists($local)) || (time() - filemtime($local)) > 86400 )
{
$contents = file_get_contents($feed);
$fp = fopen($local,"w");
fwrite($fp, $contents);
fclose($fp);
}
$xml = simplexml_load_file($local) or ("Can't");
?>
On the last but the second line the parser fails and I get the message "Can't". I have double checked the xml file and it appears to be in a good shape.
If anyone can let me know about any workarounds for this one, I will be very grateful. Here's a copy of the xml file the PHP script above tries to read (http://pastebin.com/U0fEKmZL):
<?xml version="1.0" encoding="utf-8"?>
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
<pre>
<PubmedArticle>
<MedlineCitation Status="Publisher" Owner="NLM">
<PMID Version="1">23314841</PMID>
<DateCreated>
<Year>2013</Year>
<Month>1</Month>
<Day>14</Day>
</DateCreated>
<Article PubModel="Print-Electronic">
<Journal>
<ISSN IssnType="Electronic">1432-0932</ISSN>
<JournalIssue CitedMedium="Internet">
<PubDate>
<Year>2013</Year>
<Month>Jan</Month>
<Day>12</Day>
</PubDate>
... (too long, see link)
回答1:
For some reason, the pubmed server is returning that entire XML file as an HTML file with a single <pre>
tag containing the XML. It also contains multiple XML fragments (there's several <PubmedArticle>
elements and no container around them). Clearly this is intended to be processed by some wacky custom code.
You could "unwrap" the XML by calling SimpleXML twice, like so:
$outer_xml = simplexml_load_file($local);
$inner_xml = simplexml_load_string('<dummyContainer>' . (string)$outer_xml . '</dummyContainer>');
foreach ( $inner_xml->PubmedArticle as $article )
{
// etc
}
To explain:
- the outer "XML document" is the HTML, which has a single outer element of
<pre>
- casting that to string (which I've done explicitly with
(string)
for clarity and good habit) will give you the contents of that<pre>
tag, i.e. all the<PubmedArticle>
elements - wrapping that content in a
<dummyElement>
tag will give you a valid XML document, with each of the<PubmedArticle>
elements as a top-level child in the document
回答2:
Try urlencoding.
Note:
Libxml 2 unescapes the URI, so if you want to pass e.g. b&c as the URI parameter a, you have to call simplexml_load_file(rawurlencode('http://example.com/?a=' . urlencode('b&c'))). Since PHP 5.1.0 you don't need to do this because PHP will do it for you.
simplexml_load_file
来源:https://stackoverflow.com/questions/14344849/php-simplexml-load-file-fails