What does “Error in namespaceExport(ns, exports) : undefined exports” mean?

半腔热情 提交于 2019-11-30 17:08:50

This error occurs when you try to export an object that doesn't exist. That is, the package NAMESPACE file contains the line

export(FooBarBaz)

but FooBarBaz doesn't exist in the package.


One case where this error can occur is when you are trying to create a common help page for several functions using roxygen2. In the example below, f and g are related functions to be documented in the WidgetUtils page.

#' Widget-related functions
#' 
#' Utility functions to assist working with widgets.
#' @param x An input.
#' @return A value.
#' @name WidgetUtils
#' @export
NULL

#' @rdname WidgetUtils
#' @export
f <- function(x)
{
  x + 1
}

#' @rdname WidgetUtils
#' @export
g <- function(x)
{
  x - 1
}

The mistake in this code chunk is the inclusion of the @export tag in the WidgetUtils roxygen block. This tells roxygen to generate the export line in the NAMESPACE file, but its value is NULL, so there is nothing to export. By removing the @export line, so the code will work correctly.

Be careful not to have any commented lines that begin with an apostrophe!

By bad luck, inside my function I had commented out a line that began with an apostrophe (in front of 'Battlestar Galactica' in my fake example) so it look like this:

#' @export
getMyFavoriteSciFiShows <- function() {
  myFavoriteSciFiShows <-
    c('Star Trek Next Generation',
      #'Battlestar Galactica',
      'Babylon 5')
  return(myFavoriteSciFiShows)
}

This really screwed up roxygen2 v 6.0.1 since it did not signal any errors and this is what it put into my NAMSEPACE file:

export("Galactica',")
export(Battlestar)

Not only was my desired export myFavoriteSciFiShows missing but two erroneous ones were added. These erroneous ones can result in undefined exports.

I had a very stupid typo: in roxygen2 skeleton, I copied what was meant to go into #' @return field, to @export.

Should have been:

#' @return new data frame
#' @export

Instead, I had:

#' @return
#' @export new data frame

I removed a function, and roxygen2 didn't seem to remove it from the NAMESPACE file. Go in there and delete that line manually and it will fix the error

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