R reciprocal edges in igraph in R

瘦欲@ 提交于 2019-11-29 14:31:47

In igraph, you can use the edge attribute curved to curve the edges you want.

For example, here is a graph based small adjacency matrix:

library("igraph")
adj <- matrix(c(
    0,1,1,
    1,0,1,
    0,0,0),3,3,byrow=TRUE)

library("igraph")
G <- graph.adjacency(adj)

The edge between node 0 and 1 is bidirected (Actually, it isn't, it are two edges and they just look like a bidirected edge because they are straight).:

plot(G)

To change this, we can use the edgelist:

E <- t(apply(get.edgelist(G),1,sort))

E(G)$curved <- 0
E(G)[duplicated(E) | duplicated(E,fromLast =TRUE)]$curved <- 0.2

plot(G)

Another option is my package, where this is the default behavior:

library("qgraph")
qgraph(adj)

which can be suppressed with the bidirectional argument.

Try plot(graph, edge.curved=TRUE). It definitely works in igraph 0.6, and it may also work in igraph 0.5.4 (not sure when it was added).

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