问题
When using RPostgreSQL
I find that I cannot use sqldf
in the same way. For example if I load the library and read in data into a data frame using the following code:
library(RPostgreSQL)
drv <- dbDriver("PostgreSQL")
con <- dbConnect(drv, host="localhost", user="postgres", password="xxx", dbname="yyy", port="5436")
rs <- dbSendQuery(con, "select * from table");
df<- fetch(rs, n = -1); dbClearResult(rs)
dbDisconnect(con)
I know have the contents of this table in the dataframe df
. However if I want to run a SQL command using sqldf
I would previously do something like this:
sqldf("SELECT * FROM df WHERE X > 10")
This no longer works as I get the error message:
Error in postgresqlNewConnection(drv, ...) :
RS-DBI driver: (could not connect postgres@localhost on dbname "test"
)
Error in !dbPreExists : invalid argument type
I assume this is operator error on my part, but I can't figure how what arguments to supply to sqldf
so that it just focuses on the data frame and does not try to connect to anything else.
回答1:
Using sqldf with RPostgreSQL
sqldf
will automatically work with the test
database in PostgreSQL if it sees that RPostgreSQL is loaded. So you can create a test
database in PostgreSQL and then use sqldf with that
or, you can specify the name of a different database.
See: sqldf FAQ 12
Using sqldf with RSQLite
If you want to use sqldf with RSQLite rather than with RPostgreSQL you can use sqldf
's drv
argument to force it use a non-default driver. e.g.
sqldf("select foo from bar...",drv="SQLite")
or, you can set the driver globally using the "sqldf.driver"
option. From within R:
options(sqldf.driver = "SQLite")
or, another possibility if you wish to use RSQLite is to detach
RPostgreSQL before you use sqldf and load it again afterwards.
See ?sqldf
for details.
回答2:
I had the same error and I detached the RPostgeSQL package, rerun my sqldf code and it worked fine r detach("package:RPostgreSQL", unload=TRUE)
来源:https://stackoverflow.com/questions/10237113/using-sqldf-and-rpostgresql-together