Not serialazable exception while running Linear regression scala 2.12

你说的曾经没有我的故事 提交于 2020-12-23 18:30:46

问题


While running the following spark mllib on local mode with scala 2.12.3 , encountered the following error lambda not serialazable

Any inputs would be much appreciated ? (Moving onto scala 2.11 is not an option for me) Can you please let me know what can i do to avoid this issue? Thankyou

import java.io.FileWriter

import org.apache.spark.SparkConf
import org.apache.spark.ml.Pipeline
import org.apache.spark.ml.evaluation.RegressionEvaluator
import org.apache.spark.ml.feature.StringIndexer
import org.apache.spark.ml.feature.VectorAssembler
import org.apache.spark.ml.regression.LinearRegression
import org.apache.spark.sql.SparkSession
import org.apache.spark.sql.types.DoubleType
import org.apache.spark.sql.types.IntegerType
import org.apache.spark.sql.types.StringType
import org.apache.spark.sql.types.StructField
import org.apache.spark.sql.types.StructType
import org.apache.spark.sql.types.TimestampType

import java.util.concurrent.atomic.AtomicBoolean


object MLAnalyzer {

  val conf = new SparkConf().setMaster("local[2]").set("deploy-mode", "client").set("spark.driver.bindAddress", "127.0.0.1")
        .set("spark.broadcast.compress", "false")
        .setAppName("local-spark-kafka-consumer-client")

      val spark = SparkSession
        .builder()
        .config(conf)
        .getOrCreate()
  def main(args: Array[String]): Unit = {
    process
  }


  def process():Unit= {


      // training data
      val filePath = "/home/vagrant/Desktop/Workspaces/SparkMachineLearning/sparkML/src/main/resources/train_pooling.csv"
      val modelPath = "file:///home/vagrant/Downloads/medium-articles-master/titanic_spark/training_batch/src/main/resources/poolSessionModelRecent.model"

      val schema = StructType(
        Array(
          StructField("PACKAGE_KEY", StringType),
          StructField("MOST_IDLE", IntegerType),
          StructField("MAX_WAIT", IntegerType),
          StructField("IDLE_COUNT", IntegerType),
          StructField("APPLICATION", StringType),
          StructField("LONGEST_WAIT", IntegerType),
          StructField("TIMEOUTS", IntegerType),
          StructField("LAST_ACCESS", TimestampType),
          StructField("MOST_ACTIVE", IntegerType),
          StructField("MAX_ACTIVE", IntegerType),
          StructField("MAX_IDLE", IntegerType),
          StructField("ACTIVE_COUNT", IntegerType),
          StructField("FACTOR_LOAD", DoubleType)))

          while (true) {
            Thread.sleep(100)
      // read the raw data
      var df_raw = spark
        .read
        .option("header", "true")
        //      .option("inferSchema","true")
        .schema(schema)
        .csv(filePath)

      df_raw = df_raw.drop(df_raw.col("PACKAGE_KEY"))
      df_raw = df_raw.drop(df_raw.col("MOST_IDLE"))
      df_raw = df_raw.drop(df_raw.col("MAX_IDLE"))
      df_raw = df_raw.drop(df_raw.col("MOST_ACTIVE"))
      df_raw = df_raw.drop(df_raw.col("LAST_ACCESS"))
      df_raw = df_raw.drop(df_raw.col("APPLICATION"))
      df_raw = df_raw.drop(df_raw.col("MAX_WAIT"))


      // fill all na values with 0
      val df = df_raw.na.fill(0)
      val packageKeyIndexer = new StringIndexer()
        .setInputCol("PACKAGE_KEY")
        .setOutputCol("PackageIndex")
        .setHandleInvalid("keep")

      // create the feature vector
      val vectorAssembler = new VectorAssembler()
        .setInputCols(Array("IDLE_COUNT", "TIMEOUTS", "ACTIVE_COUNT" /*, "TOTAL_REQUEST_COUNT"*/ ))
        .setOutputCol("features_intermediate")


      import org.apache.spark.ml.feature.StandardScaler
      val scaler = new StandardScaler().setWithMean(true).setWithStd(true).setInputCol("features_intermediate").setOutputCol("features")

      var pipeline: Pipeline = null
      //    if (lr1 == null) {
      val lr =
        new LinearRegression()
          .setMaxIter(100)
          .setRegParam(0.1)
          .setElasticNetParam(0.8)
          //.setFeaturesCol("features")   // setting features column
          .setLabelCol("FACTOR_LOAD") // setting label column
      // create the pipeline with the steps
      pipeline = new Pipeline().setStages(Array( /*genderIndexer, cabinIndexer, embarkedIndexer,*/ vectorAssembler, scaler, lr))


      // create the model following the pipeline steps
      val cvModel = pipeline.fit(df)

      // save the model
      cvModel.write.overwrite.save(modelPath)

      var testschema = StructType(
        Array(
          //        StructField("PACKAGE_KEY", StringType),
          StructField("IDLE_COUNT", IntegerType),
          StructField("TIMEOUTS", IntegerType),
          StructField("ACTIVE_COUNT", IntegerType)))

      val df_raw1 = spark
        .read
        //      .option("header", "true")
        .schema(testschema)
        .csv("/home/vagrant/Desktop/Workspaces/SparkMachineLearning/sparkML/src/main/resources/test_pooling.csv")

      // fill all na values with 0
      val df1 = df_raw1.na.fill(0)

      val evaluator = new RegressionEvaluator().setMetricName("rmse").setLabelCol("prediction")
      var rmse = evaluator.evaluate(cvModel.transform(df1))
      import org.apache.spark.sql.functions._
      import spark.implicits._
      val extracted = cvModel.transform(df1)

      val prediction = extracted.select("prediction").map(r => r(0).asInstanceOf[Double]).collect()
      if (prediction != null && prediction.length > 0) {
        val avg = prediction.sum / prediction.length
        val pw: FileWriter = new FileWriter("/home/vagrant/Desktop/Workspaces/SparkMachineLearning/sparkML/src/main/resources/result.csv");
        pw.append(avg.toString)
        pw.flush()
        pw.close()
        println("completed modelling process")
      } else {
        //do nothing
      }

          }


  }
}

gives me following error

Caused by: java.io.NotSerializableException: scala.runtime.LazyRef
Serialization stack:
    - object not serializable (class: scala.runtime.LazyRef, value: LazyRef thunk)
    - element of array (index: 2)
    - array (class [Ljava.lang.Object;, size 3)
    - field (class: java.lang.invoke.SerializedLambda, name: capturedArgs, type: class [Ljava.lang.Object;)
    - object (class java.lang.invoke.SerializedLambda, SerializedLambda[capturingClass=class org.apache.spark.sql.catalyst.expressions.ScalaUDF, functionalInterfaceMethod=scala/Function1.apply:(Ljava/lang/Object;)Ljava/lang/Object;, implementation=invokeStatic org/apache/spark/sql/catalyst/expressions/ScalaUDF.$anonfun$f$2:(Lscala/Function1;Lorg/apache/spark/sql/catalyst/expressions/Expression;Lscala/runtime/LazyRef;Lorg/apache/spark/sql/catalyst/InternalRow;)Ljava/lang/Object;, instantiatedMethodType=(Lorg/apache/spark/sql/catalyst/InternalRow;)Ljava/lang/Object;, numCaptured=3])
    - writeReplace data (class: java.lang.invoke.SerializedLambda)
    - object (class org.apache.spark.sql.catalyst.expressions.ScalaUDF$$Lambda$2280/878458383, org.apache.spark.sql.catalyst.expressions.ScalaUDF$$Lambda$2280/878458383@65af23c0)
    - field (class: org.apache.spark.sql.catalyst.expressions.ScalaUDF, name: f, type: interface scala.Function1)
    - object (class org.apache.spark.sql.catalyst.expressions.ScalaUDF, UDF(named_struct(IDLE_COUNT_double_vecAssembler_bc4ee3d99e56, cast(coalesce(IDLE_COUNT#1732, 0) as double), TIMEOUTS_double_vecAssembler_bc4ee3d99e56, cast(coalesce(TIMEOUTS#1735, 0) as double), ACTIVE_COUNT_double_vecAssembler_bc4ee3d99e56, cast(coalesce(ACTIVE_COUNT#1740, 0) as double))))
    - field (class: org.apache.spark.sql.catalyst.expressions.Alias, name: child, type: class org.apache.spark.sql.catalyst.expressions.Expression)
    - object (class org.apache.spark.sql.catalyst.expressions.Alias, UDF(named_struct(IDLE_COUNT_double_vecAssembler_bc4ee3d99e56, cast(coalesce(IDLE_COUNT#1732, 0) as double), TIMEOUTS_double_vecAssembler_bc4ee3d99e56, cast(coalesce(TIMEOUTS#1735, 0) as double), ACTIVE_COUNT_double_vecAssembler_bc4ee3d99e56, cast(coalesce(ACTIVE_COUNT#1740, 0) as double))) AS features_intermediate#1839)
    - element of array (index: 0)

回答1:


Upgrading to Scala 2.12.8 solved the issue. Not sure about the rootcause though.



来源:https://stackoverflow.com/questions/55993313/not-serialazable-exception-while-running-linear-regression-scala-2-12

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