Output Venn gList object and Network plot side-by-side [duplicate]

假如想象 提交于 2019-12-12 11:11:35

问题


How can we plot Network plot (igraph package plot) and Venn diagram (VennDiagram gList object) side-by-side in one PDF page?

Tried to follow below solutions, didn't work:
Plot gList side by side
Plot 2 tmap objects side-by-side
Side-by-side Venn diagram using Vennerable

Here is an example, which plots them in two pages. I used grid.newpage() to make it plot in separate pages, otherwise it gets plotted on top of each other.

library(grid)
library(igraph)
library(VennDiagram)

#network graph object
relations <- data.frame(from=c("Bob", "Cecil", "Cecil", "David",
                               "David", "Esmeralda"),
                        to=c("Alice", "Bob", "Alice", "Alice", "Bob", "Alice"))
g <- graph_from_data_frame(relations, directed=TRUE)

# venn plot object
plotVenn <- venn.diagram(
  list(A = 1:150, B = 121:170),
  filename = NULL)
class(plotVenn)
# [1] "gList"

# output to PDF, outputs into 2 pages, I need 1 page 2 plots side-by-side
pdf("temp.pdf")

#network
igraph::plot.igraph(g)

#venn
grid.newpage()
grid.draw(plotVenn)

dev.off()


回答1:


Taking inspiration from the first link above, you can "trick" your way out by making coexist a "regular" plot and a grid:

pdf("temp.pdf", )
layout(matrix(1:2, nrow=1))
igraph::plot.igraph(g)
plot.new()
pushViewport(viewport(layout = grid.layout(1, 2, widths=unit(c(0.5, 0.5), "npc"))))
pushViewport(viewport(layout.pos.col = 2))
grid.draw(plotVenn)
popViewport(0)
dev.off()




回答2:


Came up with below solution following links in the comments: Venn diagrams in multiple figure

pdf("temp.pdf")

layout(matrix(1:2, 1, byrow = TRUE))
#network
igraph::plot.igraph(g)

#network
frame()
vps <- baseViewports()
pushViewport(vps$inner, vps$figure, vps$plot)
grid.draw(plotVenn)
popViewport(2)

dev.off()


来源:https://stackoverflow.com/questions/40781252/output-venn-glist-object-and-network-plot-side-by-side

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