directional testing of spatial clustering by distance from source

问题

I have a spatial dataset of animal locations, as (x,y) points around a source (circular pattern with 5 km radius). I need to test whether the points are clustered (or repulsed) around the source relative to farther from the source, while accounting for directionality.
Things I tried:

checked out nearest neighbour and Ripley's K - could not figure out how to incorporate distance from source or directionality (plus, it looks like Ripley's is expecting a rectangular window, whereas mine is circular)
divided data into cardinal directions (N, E, S, W) and distance bins and calculated density of points per distance/direction bin. Then got stuck again.

Ideally, I'd get a result that could tell me "your points are distributed like a doughnut in direction X, are random in direction Y, and are mountain-peak-like in direction Z". I feel like this answer (resampling + mad.test) might be the right direction for me, but can't quite adapt it to my scenario...

Here's a fake dataset of a circular distribution around a point source:

library(ggplot2)
library(spatstat)
library(dplyr)

set.seed(310366)
nclust <- function(x0, y0, radius, n) {
           return(runifdisc(n, radius, centre=c(x0, y0)))
         }

c <- rPoissonCluster(1000, 0.1, nclust, radius=0.02, n=2)

df <- data.frame(x = c$x - 0.5, y = c$y - 0.5) %>%
    mutate(Distance = sqrt(x^2 + y^2)) %>%
    filter(Distance < 0.5)

ggplot(df) + 
    geom_point(aes(x = x, y = y)) +
    # source point
    geom_point(aes(x = 0, y = 0, colour = "Source"), size = 2) +
    coord_fixed()

回答1:

Maybe you can get some relevant insight by just studying the anisotropy of the pattern (even though it probably won't give you all the answers you are looking for).

Tools to detect anisotropy in point patterns include: sector K-function, pair orientation distribution, anisotropic pair correlation function. These are all described in Section 7.9 of Spatial Point Patterns: Methodology and Applications with R (dislaimer: I'm a co-author). Luckily Chapter 7 is one of the free sample chapters, so you can download it here: http://book.spatstat.org/sample-chapters.html.

It does not treat your source location in a special way, so it is not solving the entire problem, but it may serve as inspiration when you consider what to do.

You could make a Poisson model with an intensity that depends on the distance and direction from the source and see if that gives you any insight.

Below are some lightly commented code snippets since I don't have time to elaborate (remember these are just rough ideas -- there may be much better alternatives). Feel free to improve.

Uniform points in a unit disc:

library(spatstat)
set.seed(42)
X <- runifdisc(2000)
plot(X)

W <- Window(X)

Polar coordinates as covariates:

rad <- as.im(function(x,y){sqrt(x^2+y^2)}, W)
ang <- as.im(atan2, W)
plot(solist(rad, ang), main = "")

north <- ang < 45/180*pi & ang > -45/180*pi
east <- ang > 45/180*pi & ang < 135/180*pi
west <- ang < -45/180*pi & ang > -135/180*pi
south <- ang< -135/180*pi | ang > 135/180*pi
plot(solist(north, east, west, south), main = "")

plot(solist(rad*north, rad*east, rad*west, rad*south), main = "")

Fit a simple log-linear model (more complicated relations could be fitted with ippm():

mod <- ppm(X ~ rad*west + rad*south +rad*east)
mod
#> Nonstationary Poisson process
#> 
#> Log intensity:  ~rad * west + rad * south + rad * east
#> 
#> Fitted trend coefficients:
#>   (Intercept)           rad      westTRUE     southTRUE      eastTRUE 
#>    6.37408999    0.09752045   -0.23197347    0.18205119    0.03103026 
#>  rad:westTRUE rad:southTRUE  rad:eastTRUE 
#>    0.32480273   -0.29191172    0.09064405 
#> 
#>                  Estimate      S.E.    CI95.lo   CI95.hi Ztest       Zval
#> (Intercept)    6.37408999 0.1285505  6.1221355 6.6260444   *** 49.5843075
#> rad            0.09752045 0.1824012 -0.2599794 0.4550203        0.5346480
#> westTRUE      -0.23197347 0.1955670 -0.6152777 0.1513307       -1.1861588
#> southTRUE      0.18205119 0.1870798 -0.1846184 0.5487208        0.9731206
#> eastTRUE       0.03103026 0.1868560 -0.3352008 0.3972613        0.1660651
#> rad:westTRUE   0.32480273 0.2724648 -0.2092185 0.8588240        1.1920904
#> rad:southTRUE -0.29191172 0.2664309 -0.8141066 0.2302832       -1.0956377
#> rad:eastTRUE   0.09064405 0.2626135 -0.4240690 0.6053571        0.3451614
plot(predict(mod))

Non-uniform model:

lam <- 2000*exp(-2*rad - rad*north - 3*rad*west)
plot(lam)

set.seed(4242)
X2 <- rpoispp(lam)[W]
plot(X2)

Fit:

mod2 <- ppm(X2 ~ rad*west + rad*south +rad*east)
plot(predict(mod2))
plot(X2, add = TRUE, col = rgb(.9,.9,.9,.5))

Add point in centre and look at Ksector() restricted to that point as the reference point (not very informative for this example, but might be helpful in other cases??):

X0 <- ppp(0, 0, window = W)
plot(X2[disc(.1)], main = "Zoom-in of center disc(0.1) of X2")
plot(X0, add = TRUE, col = "red")
dom <- disc(.01)
plot(dom, add = TRUE, border = "blue")

X3 <- superimpose(X2, X0)

The estimated North sector K-function is above West (difference plotted):

Knorth <- Ksector(X3, 45, 135, domain = dom)
Kwest <- Ksector(X3, 135, 225, domain = dom)
plot(eval.fv(Knorth-Kwest), iso~r)

^{Created on 2018-12-18 by the reprex package (v0.2.1)}

来源：https://stackoverflow.com/questions/53743241/directional-testing-of-spatial-clustering-by-distance-from-source

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Spatial

spatstat