exponential fit in ggplot R

元气小坏坏 提交于 2019-12-02 09:41:31

Set up data:

dd <- data.frame(x=c(1981,1990,2000:2013),
  y = c(3.262897,2.570096,7.098903,5.428424,6.056302,5.593942,
  10.869635,12.425793,5.601889,6.498187,6.967503,5.358961,3.519295,
  7.137202,19.121631,6.479928))

The problem is that exponentiating any number larger than about 709 gives a number greater than the maximum value storeable as a double-precision floating-point value (approx. 1e308), and hence leads to a numeric overflow. You can easily remedy this by shifting your x variable:

lm(y~exp(x),data=dd) ## error
lm(y~exp(x-1981),data=dd) ## fine

However, you can plot the fitted value for this model more easily as follows:

library(ggplot2); theme_set(theme_bw())
ggplot(dd,aes(x,y))+geom_point()+
   geom_smooth(method="glm",
            method.args=list(family=gaussian(link="log")))
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