SVG-Cleaner seems to work perfectly: much faster thanb others, better compression, robust in my tests, batch folder proccessing, and hey! a windows installer for us lazy people!
My try: Original file size: 241 KB, after InkScape delete refs: 149K, cleaned with the tool: 38 KB, cleaned and compressed: 5 KB (.sgvz file extension).
I tried to open the last one, expecting a blank drawing... But my graphics were still there intact!
Download it here (Windows, Ubuntu, or Source)