I have no idea where to start on this one. I have seen answers that are like this but I don\'t know how to format them for what I want. I just need to target the minecraft serv
This is not possible using a batch file alone. There are two main ways to get input to another program in the system (in this case, java.exe):
In the case of Minecraft, I think the first solution is going to be significantly easier, because the modding community has already supplied a number of solutions to this exact problem. @Frxstrem recommended mcrcon, which I suppose is as good a solution as any.
Most probably the console client you are using is scriptable and this is not good aproach.
Any way here's a sendKeys.bat. You can use it like:
call sendKeys.bat "Minecraft console title" "stop{enter}"
Batch files can't do this without calling out to something else; if you're going to call to something else, use AutoHotkey - that's what it's good at.
WinActivate "the title of the Minecraft server window"
https://www.autohotkey.com/docs/commands/WinActivate.htm
Send stop{Enter}
https://www.autohotkey.com/docs/commands/Send.htm