I have a ggplot2 plotting function as part of my code. The function works fine when the file is sourced as R code, however when I include this function in an R package (and of c
I think I have found a solution/workaround.
As I noticed from sessionInfo()
the methods
package was not attached but rather loaded in the namespace. Therefore after attaching methods
(as well as grid
which was needed for a consequent function) my script work fine by oading the functions from the package.
My working sessionInfo()
looks like this now:
R version 3.2.0 (2015-04-16)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.10.3 (Yosemite)
locale:
[1] C/UTF-8/C/C/C/C
attached base packages:
[1] grid methods stats graphics grDevices utils datasets
[8] base
other attached packages:
[1] argparse_1.0.1 proto_0.3-10 greater_1.0
loaded via a namespace (and not attached):
[1] Rcpp_0.11.6 DEoptimR_1.0-2 RColorBrewer_1.1-2 plyr_1.8.2
[5] class_7.3-12 prabclus_2.2-6 tools_3.2.0 digest_0.6.8
[9] mclust_5.0.1 gtable_0.1.2 lattice_0.20-31 mvtnorm_1.0-2
[13] findpython_1.0.1 gridExtra_0.9.1 trimcluster_0.1-2 stringr_1.0.0
[17] cluster_2.0.1 RGraphics_2.0-12 fpc_2.1-9 stats4_3.2.0
[21] diptest_0.75-6 nnet_7.3-9 getopt_1.20.0 robustbase_0.92-3
[25] flexmix_2.3-13 pander_0.5.1 ggplot2_1.0.1 reshape2_1.4.1
[29] kernlab_0.9-20 magrittr_1.5 scales_0.2.4 modeltools_0.2-21
[33] MASS_7.3-40 colorspace_1.2-6 stringi_0.4-1 munsell_0.4.2
[37] rjson_0.2.15
Thanks very much for the contribution, however I would appreciate an explanation on firstly why there is the need to explicitly attach these two packages (methods
and grid
) when the functions are loaded as a package, and it is not required when the function are sourced by source()
.