I am using the multinomial distribution from the gbm
package in R. When I use the predict
function, I get a series of values:
5.0
Take a look at ?predict.gbm
, you'll see that there is a "type" parameter to the function. Try out predict(<gbm object>, <new data>, type="response")
.
predict.gbm(..., type='response')
is not implemented for multinomial, or indeed any distribution other than bernoulli or poisson.
So you have to find the most likely class (apply(.., 1, which.max)
on the vector output from prediction), as desertnaut wrote:
preds = predict(your_model, n.trees, newdata=...,type='response')
pred_class <- apply(preds, 1, which.max)
Just write a wrapper which accepts type='response' and returns this when it's a multinomial model.