Reading file opened with Python Paramiko SFTPClient.open method is slow

Question

I am trying to remote read a netcdf file.
I used paramiko package to read my file, like this:

import paramiko
from netCDF4 import Data         


        

Answer 1

Calling SFTPFile.prefetch should increase the read speed:

ncfile = sftp_client.open('mynetCDFfile')
ncfile.prefetch()
b_ncfile = ncfile.read()

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Another option is enabling read buffering, using bufsize parameter of SFTPClient.open:

ncfile = sftp_client.open('mynetCDFfile', bufsize=32768)
b_ncfile = ncfile.read()

(32768 is a value of SFTPFile.MAX_REQUEST_SIZE)

Similarly for writes/uploads:
Writing to a file on SFTP server opened using pysftp "open" method is slow.

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Yet another option is to explicitly specify the amount of data to read (it makes BufferedFile.read take a more efficient code path):

ncfile = sftp_client.open('mynetCDFfile')
b_ncfile = ncfile.read(ncfile.stat().st_size)

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If none of that works, you can download the whole file to memory instead:
Use pdfplumber and Paramiko to read a PDF file from an SFTP server

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Obligatory warning: Do not use AutoAddPolicy this way – You are losing a protection against MITM attacks by doing so. For a correct solution, see Paramiko "Unknown Server".