I have a python code doing some calculation on a remote machine, named A. I connect on A via ssh
from a machine named B.
Is there a way to display the figure on
if that doesn't work you could also try:
import matplotlib.pyplot as plt
plt.switch_backend('agg')
or
import matplotlib.pyplot as plt
plt.switch_backend('TkAgg')
this seemed to work for me
Yet, if you are trying to get a GUI working I suggest you look at this link: http://fabiorehm.com/blog/2014/09/11/running-gui-apps-with-docker/
GTK seems impossible to get working on Ubuntu with Python3. Instead, I used tkagg (from this answer):
import matplotlib
matplotlib.use('tkagg')
import matplotlib.pyplot as plt
Test that it's working with this:
import matplotlib
matplotlib.use('tkagg')
import matplotlib.pyplot as plt
plt.plot([1, 2, 3])
plt.show()
I have used IPython to solve the related problem. The steps are as follows:
Step 1: Install IPython and Jupyter in the remote machine (A) locally (assuming no root privilege) using the following commands:
pip install --user ipython
pip install --user jupyter
Update matplotlib:
pip install --user -U matplotlib
Step 2:
Run Jupyter with no browser from the code directory in the remote machine (A):
cd PATH/TO/THE/CODE
jupyter notebook --no-browser --port=8080
After this command, a URL will be given something similar to below:
http://localhost:8080/?token=5528ab1eeb3f621b90b63420f8bbfc510edf71f21437c4e2
Step 3:
Now open another terminal in the local machine (B) and connect to the remote machine (A) using ssh:
ssh -N -L 8080:localhost:8080 user_id@remote.host
The port number has to be same in step 2 and step 3. In this example, the port number is 8080.
Step 4:
Copy and paste the URL in the step 3 to a browser in your local machine (B).
Now, the notebook in the remote machine can be used through the browser and plot can be generated using the data in the remote machine.
export MPLBACKEND="agg"
this worked for me.
obviously you can set it via code as well.
Just wanted to add - if you're on Windows as the local machine, make sure you've set up Xming (an X Windows server) and Putty so you can see the remote Linux graphical applications.
I followed the instructions from here: http://laptops.eng.uci.edu/software-installation/using-linux/how-to-configure-xming-putty to do this. It also sets your display environment and variable so you don't get an error when using tkagg
as the backend.
Sure, you can enable X11 forwarding. Usually this is done by passing the -X
or -Y
option to ssh
when you connect to the remote computer
ssh -X computerA
Note that the SSH daemon on computer A will also have to be configured to enable X11 forwarding. This is done by putting
X11Forwarding yes
in computer A's sshd_config
configuration file.
If computer A's SSH daemon does not have X11 forwarding enabled, you can always have Python write the result of the calculation to a text file, download it to computer B, and use Matplotlib locally.