If I\'ve got a DataFrame in pandas which looks something like:
A B C
0 1 NaN 2
1 NaN 3 NaN
2 NaN 4 5
3 NaN NaN NaN
How ca
df=pandas.DataFrame({'A':[1, numpy.nan, numpy.nan, numpy.nan], 'B':[numpy.nan, 3, 4, numpy.nan], 'C':[2, numpy.nan, 5, numpy.nan]})
df
A B C
0 1.0 NaN 2.0
1 NaN 3.0 NaN
2 NaN 4.0 5.0
3 NaN NaN NaN
df.apply(lambda x: numpy.nan if all(x.isnull()) else x[x.first_valid_index()], axis=1).tolist()
[1.0, 3.0, 4.0, nan]
This is nothing new, but it's a combination of the best bits of @yangie's approach with a list comprehension, and @EdChum's df.apply approach that I think is easiest to understand.
First, which columns to we want to pick our values from?
In [95]: pick_cols = df.apply(pd.Series.first_valid_index, axis=1)
In [96]: pick_cols
Out[96]:
0 A
1 B
2 B
3 None
dtype: object
Now how do we pick the values?
In [100]: [df.loc[k, v] if v is not None else None
....: for k, v in pick_cols.iteritems()]
Out[100]: [1.0, 3.0, 4.0, None]
This is ok, but we really want the index to match that of the original DataFrame
:
In [98]: pd.Series({k:df.loc[k, v] if v is not None else None
....: for k, v in pick_cols.iteritems()})
Out[98]:
0 1
1 3
2 4
3 NaN
dtype: float64
groupby
in axis=1
If we pass a callable that returns the same value, we group all columns together. This allows us to use groupby.agg
which gives us the first
method that makes this easy
df.groupby(lambda x: 'Z', 1).first()
Z
0 1.0
1 3.0
2 4.0
3 NaN
This returns a dataframe with the column name of the thing I was returning in my callable
lookup
, notna
, and idxmax
df.lookup(df.index, df.notna().idxmax(1))
array([ 1., 3., 4., nan])
argmin
and slicingv = df.values
v[np.arange(len(df)), np.isnan(v).argmin(1)]
array([ 1., 3., 4., nan])