I am using the grep -f
function to extract lines from a file which match a particular pattern. Let\'s say my pattern file is pattern.txt
, as follows.
Well, there are lots of possible solutions. You are telling grep
to find all lines containing a 3, and the line '8::3rr' does in fact contain a 3. so you need to be more specific in what you're looking for.
For example, you can change the patterns to '1:', '2:', etc. to match only numbers followed by a colon. Or you could change them to '^1', '^2', etc. to match only numbers at the beginning of the line. It depends on your data, but probably you want both, so that your search for '1:' doesn't match '21:' and your search for '^5' doesn't match '53:'. In which case your patterns file would like like this:
^1:
^2:
^3:
^4:
^5:
Add ^
before your patterns so that grep
will match a line start with your pattern. If your pattern is actually set of numbers, You don't need a list of patterns. Just use ^[1-5]:
.