Redirect stdout to a file in Python?

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轻奢々
轻奢々 2020-11-21 05:26

How do I redirect stdout to an arbitrary file in Python?

When a long-running Python script (e.g, web application) is started from within the ssh session and backgoun

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  • 2020-11-21 05:46

    There is contextlib.redirect_stdout() function in Python 3.4:

    from contextlib import redirect_stdout
    
    with open('help.txt', 'w') as f:
        with redirect_stdout(f):
            print('it now prints to `help.text`')
    

    It is similar to:

    import sys
    from contextlib import contextmanager
    
    @contextmanager
    def redirect_stdout(new_target):
        old_target, sys.stdout = sys.stdout, new_target # replace sys.stdout
        try:
            yield new_target # run some code with the replaced stdout
        finally:
            sys.stdout = old_target # restore to the previous value
    

    that can be used on earlier Python versions. The latter version is not reusable. It can be made one if desired.

    It doesn't redirect the stdout at the file descriptors level e.g.:

    import os
    from contextlib import redirect_stdout
    
    stdout_fd = sys.stdout.fileno()
    with open('output.txt', 'w') as f, redirect_stdout(f):
        print('redirected to a file')
        os.write(stdout_fd, b'not redirected')
        os.system('echo this also is not redirected')
    

    b'not redirected' and 'echo this also is not redirected' are not redirected to the output.txt file.

    To redirect at the file descriptor level, os.dup2() could be used:

    import os
    import sys
    from contextlib import contextmanager
    
    def fileno(file_or_fd):
        fd = getattr(file_or_fd, 'fileno', lambda: file_or_fd)()
        if not isinstance(fd, int):
            raise ValueError("Expected a file (`.fileno()`) or a file descriptor")
        return fd
    
    @contextmanager
    def stdout_redirected(to=os.devnull, stdout=None):
        if stdout is None:
           stdout = sys.stdout
    
        stdout_fd = fileno(stdout)
        # copy stdout_fd before it is overwritten
        #NOTE: `copied` is inheritable on Windows when duplicating a standard stream
        with os.fdopen(os.dup(stdout_fd), 'wb') as copied: 
            stdout.flush()  # flush library buffers that dup2 knows nothing about
            try:
                os.dup2(fileno(to), stdout_fd)  # $ exec >&to
            except ValueError:  # filename
                with open(to, 'wb') as to_file:
                    os.dup2(to_file.fileno(), stdout_fd)  # $ exec > to
            try:
                yield stdout # allow code to be run with the redirected stdout
            finally:
                # restore stdout to its previous value
                #NOTE: dup2 makes stdout_fd inheritable unconditionally
                stdout.flush()
                os.dup2(copied.fileno(), stdout_fd)  # $ exec >&copied
    

    The same example works now if stdout_redirected() is used instead of redirect_stdout():

    import os
    import sys
    
    stdout_fd = sys.stdout.fileno()
    with open('output.txt', 'w') as f, stdout_redirected(f):
        print('redirected to a file')
        os.write(stdout_fd, b'it is redirected now\n')
        os.system('echo this is also redirected')
    print('this is goes back to stdout')
    

    The output that previously was printed on stdout now goes to output.txt as long as stdout_redirected() context manager is active.

    Note: stdout.flush() does not flush C stdio buffers on Python 3 where I/O is implemented directly on read()/write() system calls. To flush all open C stdio output streams, you could call libc.fflush(None) explicitly if some C extension uses stdio-based I/O:

    try:
        import ctypes
        from ctypes.util import find_library
    except ImportError:
        libc = None
    else:
        try:
            libc = ctypes.cdll.msvcrt # Windows
        except OSError:
            libc = ctypes.cdll.LoadLibrary(find_library('c'))
    
    def flush(stream):
        try:
            libc.fflush(None)
            stream.flush()
        except (AttributeError, ValueError, IOError):
            pass # unsupported
    

    You could use stdout parameter to redirect other streams, not only sys.stdout e.g., to merge sys.stderr and sys.stdout:

    def merged_stderr_stdout():  # $ exec 2>&1
        return stdout_redirected(to=sys.stdout, stdout=sys.stderr)
    

    Example:

    from __future__ import print_function
    import sys
    
    with merged_stderr_stdout():
         print('this is printed on stdout')
         print('this is also printed on stdout', file=sys.stderr)
    

    Note: stdout_redirected() mixes buffered I/O (sys.stdout usually) and unbuffered I/O (operations on file descriptors directly). Beware, there could be buffering issues.

    To answer, your edit: you could use python-daemon to daemonize your script and use logging module (as @erikb85 suggested) instead of print statements and merely redirecting stdout for your long-running Python script that you run using nohup now.

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  • 2020-11-21 05:46

    You need a terminal multiplexer like either tmux or GNU screen

    I'm surprised that a small comment by Ryan Amos' to the original question is the only mention of a solution far preferable to all the others on offer, no matter how clever the python trickery may be and how many upvotes they've received. Further to Ryan's comment, tmux is a nice alternative to GNU screen.

    But the principle is the same: if you ever find yourself wanting to leave a terminal job running while you log-out, head to the cafe for a sandwich, pop to the bathroom, go home (etc) and then later, reconnect to your terminal session from anywhere or any computer as though you'd never been away, terminal multiplexers are the answer. Think of them as VNC or remote desktop for terminal sessions. Anything else is a workaround. As a bonus, when the boss and/or partner comes in and you inadvertently ctrl-w / cmd-w your terminal window instead of your browser window with its dodgy content, you won't have lost the last 18 hours-worth of processing!

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  • 2020-11-21 05:53

    Based on this answer: https://stackoverflow.com/a/5916874/1060344, here is another way I figured out which I use in one of my projects. For whatever you replace sys.stderr or sys.stdout with, you have to make sure that the replacement complies with file interface, especially if this is something you are doing because stderr/stdout are used in some other library that is not under your control. That library may be using other methods of file object.

    Check out this way where I still let everything go do stderr/stdout (or any file for that matter) and also send the message to a log file using Python's logging facility (but you can really do anything with this):

    class FileToLogInterface(file):
        '''
        Interface to make sure that everytime anything is written to stderr, it is
        also forwarded to a file.
        '''
    
        def __init__(self, *args, **kwargs):
            if 'cfg' not in kwargs:
                raise TypeError('argument cfg is required.')
            else:
                if not isinstance(kwargs['cfg'], config.Config):
                    raise TypeError(
                        'argument cfg should be a valid '
                        'PostSegmentation configuration object i.e. '
                        'postsegmentation.config.Config')
            self._cfg = kwargs['cfg']
            kwargs.pop('cfg')
    
            self._logger = logging.getlogger('access_log')
    
            super(FileToLogInterface, self).__init__(*args, **kwargs)
    
        def write(self, msg):
            super(FileToLogInterface, self).write(msg)
            self._logger.info(msg)
    
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  • 2020-11-21 05:56

    The other answers didn't cover the case where you want forked processes to share your new stdout.

    To do that:

    from os import open, close, dup, O_WRONLY
    
    old = dup(1)
    close(1)
    open("file", O_WRONLY) # should open on 1
    
    ..... do stuff and then restore
    
    close(1)
    dup(old) # should dup to 1
    close(old) # get rid of left overs
    
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