I am interested in generating an array(or numpy Series) of length N that will exhibit specific autocorrelation at lag 1. Ideally, I want to specify the mean and variance, as wel
If you are interested only in the auto-correlation at lag one, you can generate an auto-regressive process of order one with the parameter equal to the desired auto-correlation; this property is mentioned on the Wikipedia page, but it's not hard to prove it.
Here is some sample code:
import numpy as np
def sample_signal(n_samples, corr, mu=0, sigma=1):
assert 0 < corr < 1, "Auto-correlation must be between 0 and 1"
# Find out the offset `c` and the std of the white noise `sigma_e`
# that produce a signal with the desired mean and variance.
# See https://en.wikipedia.org/wiki/Autoregressive_model
# under section "Example: An AR(1) process".
c = mu * (1 - corr)
sigma_e = np.sqrt((sigma ** 2) * (1 - corr ** 2))
# Sample the auto-regressive process.
signal = [c + np.random.normal(0, sigma_e)]
for _ in range(1, n_samples):
signal.append(c + corr * signal[-1] + np.random.normal(0, sigma_e))
return np.array(signal)
def compute_corr_lag_1(signal):
return np.corrcoef(signal[:-1], signal[1:])[0][1]
# Examples.
print(compute_corr_lag_1(sample_signal(5000, 0.5)))
print(np.mean(sample_signal(5000, 0.5, mu=2)))
print(np.std(sample_signal(5000, 0.5, sigma=3)))
The parameter corr
lets you set the desired auto-correlation at lag one and the optional parameters, mu
and sigma
, let you control the mean and standard deviation of the generated signal.