I am developing an app with flask and SQL Alchemy. I need to display the queries executed to generate a page alongside the time each query took for debugging
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I haven't used it myself, but it seems that Flask Debug-toolbar may help with this.
https://github.com/mgood/flask-debugtoolbar
It's a port of the django-debug-toolbar, which can be used for profiling queries.
The documentation of Flask Debug-toolbar doesn't mention it, but there is code for a SQLAlchemyDebugPanel.
So I think it may be well worth to take a look at the project, and see if it does what you need.