To paraphrase an old quote: A programmer had a problem. He thought, "I know, I'll use threads." Now the programmer has two problems. (Often attributed to JWZ, but it seems to predate his use of it talking about regexes.)
A good rule of thumb is "Don't use threads, unless there's a very compelling reason to use threads." Multiple threads are asking for trouble. Try to find a good way to solve the problem without using multiple threads, and only fall back to using threads if avoiding it is as much trouble as the extra effort to use threads. Also, consider switching to multiple threads if you're running on a multi-core/multi-CPU machine, and performance testing of the single threaded version shows that you need the performance of the extra cores.