Using apply with a different function argument for each element's evaluation

Question

Let\'s say I have a matrix, mat.

mat <- matrix(1:5, nrow = 10, ncol = 3, byrow = TRUE)

And I have some sort of function that I want to apply

Answer 1

In this specific case, just roll the "est" values out to a matrix that matches the "true" values. Then you can subtract matrices (which R will automatically do componentwise) and use apply(), or here, colMeans():

> true <- matrix(1:5, nrow = 10, ncol = 3, byrow = TRUE)
> est <- matrix(1:3,nrow=nrow(true),ncol=ncol(true),byrow=TRUE)
> sqrt(colMeans((true-est)^2))
[1] 2.449490 1.732051 1.414214
> 

In more general cases involving lists, mapply() may be helpful.