I am trying to use CHOLMOD
with CUDA
acceleration in SuiteSparse 4.4.4
. I compiled it according to the user guide and I could run gp
Referring to section 7, p34 of the CHOLMOD UserGuide.pdf that ships with SuiteSparse 4.4.4:
Only the long integer version of CHOLMOD can leverage GPU acceleration.
The long integer version is distinguished by api calls like cholmod_l_start
instead of cholmod_start
.
With the following modifications to your program:
#include
#include
#include
#include
#include
#include "cholmod.h"
int main (void)
{
struct timeval t1, t2;
double elapsedTime;
const char* matFile = "../Matrix/nd6k/nd6k.mtx";
FILE* fp = fopen(matFile, "r");
assert(fp != NULL);
cholmod_sparse *A ;
cholmod_dense *x, *b;
cholmod_factor *L ;
cholmod_common* c = (cholmod_common*)malloc(sizeof(cholmod_common));
cholmod_l_start (c) ; /* start CHOLMOD */
c->useGPU = 1;
c->supernodal = CHOLMOD_SUPERNODAL;
A = cholmod_l_read_sparse (fp, c) ; /* read in a matrix */
cholmod_l_print_sparse (A, "A", c) ; /* print the matrix */
fclose(fp);
if (A == NULL || A->stype == 0) /* A must be symmetric */
{
cholmod_l_free_sparse (&A, c) ;
cholmod_l_finish (c) ;
return (0) ;
}
b = cholmod_l_ones (A->nrow, 1, A->xtype, c) ; /* b = ones(n,1) */
gettimeofday(&t1, NULL);
L = cholmod_l_analyze (A, c) ; /* analyze */
cholmod_l_factorize (A, L, c) ; /* factorize */
x = cholmod_l_solve (CHOLMOD_A, L, b, c) ; /* solve Ax=b */
gettimeofday(&t2, NULL);
elapsedTime = (t2.tv_sec - t1.tv_sec) * 1000.0;
elapsedTime += (t2.tv_usec - t1.tv_usec) / 1000.0;
printf("Time: %.4f ms\n", elapsedTime);
cholmod_l_gpu_stats(c);
cholmod_l_free_factor (&L, c) ; /* free matrices */
cholmod_l_free_sparse (&A, c) ;
cholmod_l_free_dense (&x, c) ;
cholmod_l_free_dense (&b, c) ;
cholmod_l_finish (c) ; /* finish CHOLMOD */
return (0) ;
}
I get output like this:
$ ./prog
CHOLMOD sparse: A: 18000-by-18000, nz 3457658, upper. OK
Time: 14570.3950 ms
CHOLMOD GPU/CPU statistics:
SYRK CPU calls 888 time 1.0637e-01
GPU calls 213 time 8.9194e-02
GEMM CPU calls 711 time 1.1511e-01
GPU calls 213 time 1.9351e-03
POTRF CPU calls 217 time 3.2180e-02
GPU calls 5 time 1.5788e-01
TRSM CPU calls 217 time 6.0409e-01
GPU calls 4 time 5.6943e-02
time in the BLAS: CPU 8.5774e-01 GPU 3.0595e-01 total: 1.1637e+00
assembly time 0.0000e+00 0.0000e+00
$
indicating the GPU is being used.