I am trying to read chunks of data from a file directly into a struct but the padding is causing too much data to be read and the data to be misaligned.
Do I have to man
If you're writing the entire structure out in binary, you don't need to read it as if you had stored each variable separately. You would just read in the size of the structure from file into the struct you have defined.
Header header;
in.read((char*)&header, sizeof(Header));
If you're always running on the same architecture or the same machine, you won't need to worry about endian issues as you'll be writing them out the same way your application needs to read them in. If you are creating the file on one architecture and expect it to be portable/usable on another, then you will need to swap bytes accordingly. The way I have done this in the past is to create a swap method of my own. (for example Swap.h)
Swap.h - This is the header you use within you're code
void swap(unsigned char *x, int size);
------------------
SwapIntel.cpp - This is what you would compile and link against when building for Intel
void swap(unsigned char *x, int size)
{
return; // Do nothing assuming this is the format the file was written for Intel (little-endian)
}
------------------
SwapSolaris.cpp - This is what you would compile and link against when building for Solaris
void swap(unsigned char *x, int size)
{
// Byte swapping code here to switch from little-endian to big-endian as the file was written on Intel
// and this file will be the implementation used within the Solaris build of your product
return;
}