I have an R markdown document like this:
The following graph shows a histogram of variable x:
```{r}
hist(x)
```
I want to introduce a loo
As already mentioned, any loop needs to be in a code chunk. It might be easier to to give the histogram a title rather than add a line of text as a header for each one.
```{r}
for i in length(somelist) {
title <- paste("The following graph shows a histogram of", somelist[[ i ]])
hist(somelist[[i]], main=title)
}
```
However, if you would like to create multiple reports then check out this thread.
Which also has a link to this example.
It seems when the render call is made from within a script, the environmental variables can be passed to the Rmd file.
So an alternative might be to have your R script:
for i in length(somelist) {
rmarkdown::render('./hist_.Rmd', # file 2
output_file = paste("hist", i, ".html", sep=''),
output_dir = './outputs/')
}
And then your Rmd chunk would look like:
```{r}
hist(i)
```
Disclaimer: I haven't tested this.