I have some trivial JavaScript to effect a style change:
sel = document.getElementById(\'my_id\');
sel.className = sel.className.replace(/item-[1-9]-selected
I was suffering the same issue. danorton's 'toggling display' fix did work for me when added to the step function of my animation but I was concerned about performance and I looked for other options.
In my circumstance the element which wasn't repainting was within an absolutely position element which did not, at the time, have a z-index. Adding a z-index to this element changed the behaviour of Chrome and repaints happened as expected -> animations became smooth.
I doubt that this is a panacea, I imagine it depends why Chrome has chosen not to redraw the element but I'm posting this specific solution here in the help it hopes someone.
Cheers, Rob
tl;dr >> Try adding a z-index to the element or a parent thereof.