I have a problem with running a python Hello World mpi4py code on a virtual machine.
The hello.py code is:
#!/usr/bin/python
#hello.py
from mpi4py import
As suggested above and in this question for C, this has to do with having mpirun
coming from a different MPI than mpi4py
was linked against.
In my case, and I suspect the same is true for many other Python users, this came from having originally installed mpi4py
through conda
, which pulled a non-system version of MPI into my conda
-- i.e. which mpirun
gave a path in my conda
environment.
To solve the problem, I ran conda remove mpi4py
and then pip install mpi4py
, which seemed to rebuild mpi4py
against the MPI in the conda
environment and solved the issue.