P4V has been crapping out on me when attempting to resolve a large number of files as part of an integration. I want to be able to do this in the command line.
You can use p4 resolve -am [file ...] which will skip the files with conflicts.
If you specify a file, you will work on that file only. If you specify ..., you will work on files below your working directory. If you do not specify a file, it will work on all of the files in your workspace.