Remove rows with all or some NAs (missing values) in data.frame

Question

I\'d like to remove the lines in this data frame that:

a) contain NAs across all columns. Below is my example data frame.

Answer 1

Another option if you want greater control over how rows are deemed to be invalid is

final <- final[!(is.na(final$rnor)) | !(is.na(rawdata$cfam)),]

Using the above, this:

             gene hsap mmul mmus rnor cfam
1 ENSG00000208234    0   NA   NA   NA   2
2 ENSG00000199674    0   2    2    2    2
3 ENSG00000221622    0   NA   NA   2   NA
4 ENSG00000207604    0   NA   NA   1    2
5 ENSG00000207431    0   NA   NA   NA   NA
6 ENSG00000221312    0   1    2    3    2

Becomes:

             gene hsap mmul mmus rnor cfam
1 ENSG00000208234    0   NA   NA   NA   2
2 ENSG00000199674    0   2    2    2    2
3 ENSG00000221622    0   NA   NA   2   NA
4 ENSG00000207604    0   NA   NA   1    2
6 ENSG00000221312    0   1    2    3    2

...where only row 5 is removed since it is the only row containing NAs for both rnor AND cfam. The boolean logic can then be changed to fit specific requirements.