How can I tell if a certain package was already installed?

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庸人自扰
庸人自扰 2021-02-15 15:18

When I install the yaml package, an annoying error message pops up in RStudio if it had been previously installed. How can I tell if the package was already installed so I can d

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  •  清酒与你
    2021-02-15 16:03

    I am using the following construction in my code. The essential part is about calling library within tryCatch and installing it if it fails:

    lib.auto <- function(lib, version=NULL, install.fun=install.packages, ...) {
      tryCatch(
        library(lib, character.only=T),
        error=function(e) {
          install.fun(lib, ...)
          library(lib, character.only=T)
        }
      )
      if (!is.null(version)) {
        if (packageVersion(lib) < version) {
          require(devtools)
          detach(paste0('package:', lib), unload=T, character.only=T)
          install.fun(lib, ...)
          library(lib, character.only=T)
          if (packageVersion(lib) < version) {
            stop(sprintf('Package %s not available in version %s. Installed version: %s', lib, version,
                         packageVersion(lib)))
          }
        }
      }
    }
    
    lib.auto('BiocInstaller',
             install.fun=function(lib) {
               source("http://bioconductor.org/biocLite.R")
               biocLite(lib)
             })
    
    options(repos=biocinstallRepos())
    lib.auto.bioc <- lib.auto
    
    lib.auto.github <- function(lib, version=NULL, user, subdir=NULL, repo=lib)
      lib.auto(lib, version=version,
               install.fun=function(l, u, s, r) {
                 require(devtools)
                 install_github(r, u, subdir=s)
               },
               user, subdir, repo           
      )
    

    The lib.auto function installs from CRAN and Bioconductor, if required. The lib.auto.github installs from GitHub.

    I am thinking about pushing this code into a package.

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