I found this bug http://code.google.com/p/android/issues/detail?id=20731 that is resolved but it did not fix this exactly, but I see in comments that this is mentioned there as
I found solution. I have to create Android library from my java library as well and then include it as android library as well as Java library , Then I have to reorder build path export items so Android "Library Projects” are last . And well not much work, Now even rename refactoring works , with some warning but works :) , Well I am happy developer again.