I created a package in PyPI named virtdc. I made some changes and uploaded 2 different versions 0.1.0 and 0.1.1. Now I deleted version 0.1.1 through the PyPI web interface and t
I had the same problem, and it seems there is no straight fix:
http://sourceforge.net/p/pypi/support-requests/468
However, if you want to upload a source distribution, there is a workaround which is not too ugly. You can build a "zip" archive instead of a "tar.gz" archive. You can control this e.g. via
python setup.py sdist --formats=zip
This way, you obtain a different file name. Then you might append the upload command directly
python setup.py sdist --formats=zip upload
Or you might use twine to upload after building:
twine upload dist/*