I sometimes need to have two different branches of a GitHub repo on my local disk at the same time. (especially when dealing with gh-pages)
I usually do this by making
I don't think it is possible to do what you want to do with the current version (1.0.9.2) but here is what I do to work on two branches.
Clone the two branches from the Git Shell
git clone https://your-project/master/ master
git clone https://your-project/gh-pages/ gh-pages
In Git for Windows, drag & drop the folder you want to work on.