My project used to be fine - errors showed up in the file margin, the editor breadcrumb, the problems view and in the package explorer tree as little red X marks.
Somewh
I had a similar problem. I imported a project which also uses aspectj. compile errors were shown in the editors, but not in the package/navigator-explorers. And the project was marked as java-project, maven2 and aspectj.
Build path seemed ok.(jre was there, maven and aspectj.)
After long search i found that in the .project file the following entry was missing:
org.eclipse.jdt.core.javabuilder
pasted that in and problem was solved!