used:
typings install jquery --global
typings ERR! message Unable to find \"jquery\" (\"npm\") in the registry. Did you want to try searching another source? Al
Try:
typings install dt~jquery --global --save
EDIT:
from https://github.com/typings/typings#updating-from-0x-to-10
If you want to install from DefinitelyTyped, be explicit (use dt~ --global). For example: typings install dt~angular-component-router --global --save
(see also Fidan Hakaj's comment below)